Ts/Tv

发表于

The stricter the calls, the bigger ts/tv value one should get.

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vcftools/vcftools-build/bin/vcftools --gzvcf input.vcf.gz --TsTv-summary --out input.gz.TsTv
zcat input.vcf.gz| vcftools/vcftools-build/bin/vcf-tstv > input.vcf.gz.tstv